How to import a csv file using python with headers intact, where first column is a non-numerical
How to import a csv file using python with headers intact, where first column is a non-numerical
For Python 3
Remove the rb
argument and use either r
or dont pass argument (default read mode
).
with open( <path-to-file>, r ) as theFile:
reader = csv.DictReader(theFile)
for line in reader:
# line is { workers: w0, constant: 7.334, age: -1.406, ... }
# e.g. print( line[ workers ] ) yields w0
print(line)
For Python 2
import csv
with open( <path-to-file>, rb ) as theFile:
reader = csv.DictReader( theFile )
for line in reader:
# line is { workers: w0, constant: 7.334, age: -1.406, ... }
# e.g. print( line[ workers ] ) yields w0
Python has a powerful built-in CSV handler. In fact, most things are already built in to the standard library.
Pythons csv module handles data row-wise, which is the usual way of looking at such data. You seem to want a column-wise approach. Heres one way of doing it.
Assuming your file is named myclone.csv
and contains
workers,constant,age
w0,7.334,-1.406
w1,5.235,-4.936
w2,3.2225,-1.478
w3,0,0
this code should give you an idea or two:
>>> import csv
>>> f = open(myclone.csv, rb)
>>> reader = csv.reader(f)
>>> headers = next(reader, None)
>>> headers
[workers, constant, age]
>>> column = {}
>>> for h in headers:
... column[h] = []
...
>>> column
{workers: [], constant: [], age: []}
>>> for row in reader:
... for h, v in zip(headers, row):
... column[h].append(v)
...
>>> column
{workers: [w0, w1, w2, w3], constant: [7.334, 5.235, 3.2225, 0], age: [-1.406, -4.936, -1.478, 0]}
>>> column[workers]
[w0, w1, w2, w3]
>>> column[constant]
[7.334, 5.235, 3.2225, 0]
>>> column[age]
[-1.406, -4.936, -1.478, 0]
>>>
To get your numeric values into floats, add this
converters = [str.strip] + [float] * (len(headers) - 1)
up front, and do this
for h, v, conv in zip(headers, row, converters):
column[h].append(conv(v))
for each row instead of the similar two lines above.
How to import a csv file using python with headers intact, where first column is a non-numerical
You can use pandas library and reference the rows and columns like this:
import pandas as pd
input = pd.read_csv(path_to_file);
#for accessing ith row:
input.iloc[i]
#for accessing column named X
input.X
#for accessing ith row and column named X
input.iloc[i].X